SidaGhanaV1, Main, Exploration, bibRecord, 001184

Prevalence of hepatitis G virus and characterization of viral genome in Ghana

Identifieur interne : 001184 ( Main/Exploration ); précédent : 001183; suivant : 001185

Prevalence of hepatitis G virus and characterization of viral genome in Ghana

Auteurs : Takahide Saito [Japon] ; Koh-Ichi Ishikawa [Japon] ; Mubarak Osei-Kwasi [Ghana] ; Tamiko Kaneko [Japon] ; James A. M Brandful [Ghana] ; Victor Nuvor [Ghana] ; Simeon Aidoo [Ghana] ; William Ampofo [Ghana] ; Frank A. Apeagyei [Ghana] ; Jane E. Ansah [Ghana] ; Yaw Adu-Sarkodie [Ghana] ; Francis K. Nkrumah [Ghana] ; Kenji Abe [Japon]

Source :

Hepatology Research [ 1386-6346 ] ; 1999.

RBID : ISTEX:73A2BA2DCE7C630A37FEEE65A5CC15D5E68DD821

Descripteurs français

Wicri :
- topic : Recherche médicale.

English descriptors

Abstract

The prevalence of hepatitis G virus (HGV) infection was investigated in 85 human immunodeficiency virus (HIV)-infected and 30 uninfected individuals' sera obtained from Ghanaians. HGV RNA in serum was identified by a nested reverse transcription polymerase chain reaction (RT-PCR) using primers derived from the 5′-noncoding region. We also tested for hepatitis C virus by nested RT-PCR and for hepatitis B surface antigen (HBsAg) by passive hemagglutination method. HGV RNA was detected in 17 of 85 (20%) HIV sero-positive and three of 30 (10%) sero-negative Ghanaians, respectively. The prevalence of HGV infection was much greater than hepatitis C (0.9%) and hepatitis B virus (7.8%) infections in the present study. Ninety four percent of HGV infected patients were seronegative for hepatitis B and C virus infections. The nine different Ghanaian isolates in the 5′-untranslated region of the HGV genome had one nucleotide deletion at the same position when compared with other HGV isolates. Phylogenetic analysis showed that all Ghanaian isolates belonged to type 1 (West Africa type) of the HGV genotypes. Moreover, we determined nearly full-length nucleotide sequence of the HGV genome (denoted HGV-GA128) recovered from a Ghanaian infected with HIV. The HGV-GA128 was composed of 9231 nucleotides and had a single open reading frame, encoding 2843 amino acid residues. This isolate differed from previously reported HGV/GBV-C isolates by 10–15% of the nucleotide sequence and 2–5% of the amino acid sequence. Our data indicate a high prevalence of HGV, especially genotype 1, in Ghana.

Url:

https://api.istex.fr/document/73A2BA2DCE7C630A37FEEE65A5CC15D5E68DD821/fulltext/pdf

DOI: 10.1016/S1386-6346(98)00095-3

Affiliations:

Links toward previous steps (curation, corpus...)

to stream Istex, to step Corpus: 000019
to stream Istex, to step Curation: 000019
to stream Istex, to step Checkpoint: 000691
to stream Main, to step Merge: 001274
to stream Main, to step Curation: 001184

Le document en format XML

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<term>Boehringer mannheim</term>
<term>Cdna</term>
<term>Comput appl biosci</term>
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<term>Elsevier science ireland</term>
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<term>Entire sequence</term>
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<term>Genotype</term>
<term>Ghanaian</term>
<term>Ghanaian individuals</term>
<term>Hepatitis</term>
<term>Hepatol commun</term>
<term>Hepatology</term>
<term>Hepatology research</term>
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<term>Human virus</term>
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<term>Infection rate</term>
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<term>Saito</term>
<term>Same position</term>
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<term>Genetic heterogeneity</term>
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<term>Hepatitis</term>
<term>Hepatol commun</term>
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<term>National institute</term>
<term>Nucleotide</term>
<term>Nucleotide deletion</term>
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<term>Passive hemagglutination method</term>
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<front><div type="abstract" xml:lang="en">The prevalence of hepatitis G virus (HGV) infection was investigated in 85 human immunodeficiency virus (HIV)-infected and 30 uninfected individuals' sera obtained from Ghanaians. HGV RNA in serum was identified by a nested reverse transcription polymerase chain reaction (RT-PCR) using primers derived from the 5′-noncoding region. We also tested for hepatitis C virus by nested RT-PCR and for hepatitis B surface antigen (HBsAg) by passive hemagglutination method. HGV RNA was detected in 17 of 85 (20%) HIV sero-positive and three of 30 (10%) sero-negative Ghanaians, respectively. The prevalence of HGV infection was much greater than hepatitis C (0.9%) and hepatitis B virus (7.8%) infections in the present study. Ninety four percent of HGV infected patients were seronegative for hepatitis B and C virus infections. The nine different Ghanaian isolates in the 5′-untranslated region of the HGV genome had one nucleotide deletion at the same position when compared with other HGV isolates. Phylogenetic analysis showed that all Ghanaian isolates belonged to type 1 (West Africa type) of the HGV genotypes. Moreover, we determined nearly full-length nucleotide sequence of the HGV genome (denoted HGV-GA128) recovered from a Ghanaian infected with HIV. The HGV-GA128 was composed of 9231 nucleotides and had a single open reading frame, encoding 2843 amino acid residues. This isolate differed from previously reported HGV/GBV-C isolates by 10–15% of the nucleotide sequence and 2–5% of the amino acid sequence. Our data indicate a high prevalence of HGV, especially genotype 1, in Ghana.</div>
</front>
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<name sortKey="Kaneko, Tamiko" sort="Kaneko, Tamiko" uniqKey="Kaneko T" first="Tamiko" last="Kaneko">Tamiko Kaneko</name>
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<country name="Ghana"><region name="Région du Grand Accra"><name sortKey="Osei Kwasi, Mubarak" sort="Osei Kwasi, Mubarak" uniqKey="Osei Kwasi M" first="Mubarak" last="Osei-Kwasi">Mubarak Osei-Kwasi</name>
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<name sortKey="Adu Sarkodie, Yaw" sort="Adu Sarkodie, Yaw" uniqKey="Adu Sarkodie Y" first="Yaw" last="Adu-Sarkodie">Yaw Adu-Sarkodie</name>
<name sortKey="Aidoo, Simeon" sort="Aidoo, Simeon" uniqKey="Aidoo S" first="Simeon" last="Aidoo">Simeon Aidoo</name>
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<name sortKey="Ansah, Jane E" sort="Ansah, Jane E" uniqKey="Ansah J" first="Jane E" last="Ansah">Jane E. Ansah</name>
<name sortKey="Apeagyei, Frank A" sort="Apeagyei, Frank A" uniqKey="Apeagyei F" first="Frank A" last="Apeagyei">Frank A. Apeagyei</name>
<name sortKey="Brandful, James A M" sort="Brandful, James A M" uniqKey="Brandful J" first="James A. M" last="Brandful">James A. M Brandful</name>
<name sortKey="Nkrumah, Francis K" sort="Nkrumah, Francis K" uniqKey="Nkrumah F" first="Francis K" last="Nkrumah">Francis K. Nkrumah</name>
<name sortKey="Nuvor, Victor" sort="Nuvor, Victor" uniqKey="Nuvor V" first="Victor" last="Nuvor">Victor Nuvor</name>
</country>
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	Le SIDA au Ghana (serveur d'exploration)
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Le SIDA au Ghana (serveur d'exploration)

Prevalence of hepatitis G virus and characterization of viral genome in Ghana

Prevalence of hepatitis G virus and characterization of viral genome in Ghana

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Abstract

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